Pancreatic Neuroendocrine Cancer Genomic Findings

Illustrates Domains

GF

Illustrates Variables

GFTSTDTL
GFRESCAT
GFINHERT
GFSYM
GFSYMTYP
GFNAM
GFSPEC
 GFMETHOD
GFASYDTC

Content

This example shows the representation of a single gene assessment in a neuroendocrine pancreatic cancer study. For this test, only the MEN1 was evaluated. 

gf.xpt
Row 1:Shows the single nucleotide variation associated with the MEN1 gene represented as the predicted change to the coding sequence.
Row 2:Shows the predicted amino acid change associated with the MEN1 gene represented as the predicted change to the amino acid sequence.

gf.xpt

RowSTUDYIDDOMAINUSUBJIDGFSEQGFTESTCDGFTESTGFTSTDTLGFCATGFORRESGFORRESUGFSTRESCGFSTRESNGFSTRESUGFRESCATGFINHERTGFSYMGFSYMTYPGFNAMGFSPECGFMETHODVISITNUMGFDTC
GFASYDTC
1PACA009GF9011SNVSingle Nucleotide Variation

PREDICTED CODING SEQUENCE CHANGE

PRECISION MEDICINE TESTING

c.722G>A
c.722G>A

PATHOGENICGERMLINE VARIATIONMEN1PROTEIN CODINGXXXXDNAGENOME SEQUENCING12017-05-05
2019-07-06
2PACA009GF9012SNVSingle Nucleotide VariationPREDICTED AMINO ACID CHANGEPRECISION MEDICINE TESTINGp.Cys241Tyr
p.Cys241Tyr

PATHOGENICGERMLINE VARIATIONMEN1PROTEIN CODINGXXXXDNAGENOME SEQUENCING12017-05-05
2019-07-06

GF NSV Metadata

Variable

Label

Type

Role

Origin

GFASYDTCAssay Date/TimetextNon-Standard TimingCRF